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Intron Name: Anas_platyrhynchos_platyrhynchos_18_1460043_1460632_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1460043 - 1460632

Intron Length:

590

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGCTC

5'SS Class:

strong_major

3'SS Sequence:

GTTTATTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

TGCTGTTTATTT

Flanking Amino Acid:

KYLEEENKWQNKFLDYEKRK

Intron Amino Acid Position:

251

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

0.9

38.2

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

87.4

0.84

0.8

84.8

35.4

Minor 5ss

29.9

-2.3

3.4

45.6

Minor BPS

0.01

67.71

44.1

Associated Gene:

Gene:

LRSAM1

Ensembl Gene ID:

ENSAPLG00000005497

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045132

1446718 - 1469843

23126

ENSAPLT00000005710

1447029 - 1470969

23941

ENSAPLT00000046007

1446718 - 1469843

23126