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Intron Name: Anas_platyrhynchos_platyrhynchos_18_1460764_1461848_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1460764 - 1461848

Intron Length:

1085

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCAAG

5'SS Class:

strong_major

3'SS Sequence:

TGATCTCTTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTGAT

U12 Branch Point Sequence:

TGTGTCTGATCT

Flanking Amino Acid:

TESIQQFLCKECGIAYYPPS

Intron Amino Acid Position:

207

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.6

0.93

0.9

77.9

38.6

Major BPS

73.6

0.59

1.2

65.3

43.7

Major PPT

78.9

0.65

0.9

69.9

41.2

Minor 5ss

38.7

-1.3

2.8

47.8

47.9

Minor BPS

51.6

0.13

1.8

73.14

43.6

Associated Gene:

Gene:

LRSAM1

Ensembl Gene ID:

ENSAPLG00000005497

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045132

1446718 - 1469843

23126

ENSAPLT00000005710

1447029 - 1470969

23941

ENSAPLT00000046007

1446718 - 1469843

23126