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Intron Name: Anas_platyrhynchos_platyrhynchos_18_1464770_1465611_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1464770 - 1465611

Intron Length:

842

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAAGAT

5'SS Class:

strong_major

3'SS Sequence:

GTTAATACCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTAAT

U12 Branch Point Sequence:

TTTCTGTTAATA

Flanking Amino Acid:

VDIGQLTSLQVLNLERNLLK

Intron Amino Acid Position:

108

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

0.9

77.5

30.5

Major BPS

84.4

0.85

34.5

Major PPT

63.6

0.31

0.9

41.1

Minor 5ss

31.4

-2.1

3.5

46.6

48.7

Minor BPS

60.8

0.33

76.1

35.4

Associated Gene:

Gene:

LRSAM1

Ensembl Gene ID:

ENSAPLG00000005497

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046007

1446718 - 1469843

23126

ENSAPLT00000045132

1446718 - 1469843

23126

ENSAPLT00000005710

1447029 - 1470969

23941