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Intron Name: Anas_platyrhynchos_platyrhynchos_18_1466673_1467131_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1466673 - 1467131

Intron Length:

459

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATGTTA

5'SS Class:

strong_major

3'SS Sequence:

TTTTCCTCCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTCAT

U12 Branch Point Sequence:

TTGTGCTCATGT

Flanking Amino Acid:

FATCKVLQKKVLIIHTNNLT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.75

77.6

Major BPS

79.7

0.74

79.6

35.6

Major PPT

86.5

0.82

0.6

85.2

22.1

Minor 5ss

40.4

-1.1

3.3

55.8

48.3

Minor BPS

44.3

-0.3

2.4

67.69

48.8

Associated Gene:

Gene:

LRSAM1

Ensembl Gene ID:

ENSAPLG00000005497

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045132

1446718 - 1469843

23126

ENSAPLT00000005710

1447029 - 1470969

23941