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Intron Name: Anas_platyrhynchos_platyrhynchos_18_1468834_1470897_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1468834 - 1470897

Intron Length:

2064

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGCAAT

5'SS Class:

strong_major

3'SS Sequence:

CTTCTCTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAC

U12 Branch Point Sequence:

TGTGTTCTAACT

Flanking Amino Acid:

RKRLEYQMCLAKEAGADDVL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

79.7

35.3

Major BPS

84.6

0.86

0.8

83.9

22.3

Major PPT

88.1

0.86

0.7

80.4

31.6

Minor 5ss

41.2

-1

2.9

54.5

43.9

Minor BPS

56.8

0.29

1.8

76.65

40.1

Associated Gene:

Gene:

LRSAM1

Ensembl Gene ID:

ENSAPLG00000005497

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005710

1447029 - 1470969

23941