Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_18_1474925_1475043_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1474925 - 1475043

Intron Length:

119

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAGGTGAC

5'SS Class:

major

3'SS Sequence:

CCGTTCTTCATAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTAAC

U12 Branch Point Sequence:

TTGTCTCTAACG

Flanking Amino Acid:

LAPKIGPLGLSPKKVGDDIA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.1

0.66

68.5

36.9

Major BPS

72.3

0.55

73.3

28.9

Major PPT

72.9

0.52

0.8

67.9

32.2

Minor 5ss

31.7

-2.1

3.4

39.3

41.1

Minor BPS

65.4

0.34

1.8

71.87

41.2

Associated Gene:

Gene:

RPL12

Ensembl Gene ID:

ENSAPLG00000005450

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005635

1474725 - 1477047

2323