Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_18_1476390_1476916_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1476390 - 1476916

Intron Length:

527

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTACT

5'SS Class:

strong_major

3'SS Sequence:

CTTCTAACTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAC

U12 Branch Point Sequence:

TTTCTTCTAACT

Flanking Amino Acid:

RHRSLARELSGTIKEILGTA

Intron Amino Acid Position:

127

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.1

1.13

0.6

93.5

20.3

Major BPS

84.6

0.86

0.8

83.9

22.3

Major PPT

77.3

0.61

0.9

70.2

Minor 5ss

38.4

-1.3

2.8

52.3

44.3

Minor BPS

65.7

0.57

1.6

85.74

33.9

Associated Gene:

Gene:

RPL12

Ensembl Gene ID:

ENSAPLG00000005450

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005635

1474725 - 1477047

2323