Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_18_1489970_1490943_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1489970 - 1490943

Intron Length:

974

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTCAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTAAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTGAAT

U12 Branch Point Sequence:

TTTTTTTTAAAG

Flanking Amino Acid:

PKAEDISSKQREQSLYWLAI

Intron Amino Acid Position:

120

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.9

75.9

35.2

Major BPS

53.2

0.08

1.4

63.6

40.3

Major PPT

87.3

0.84

0.9

89.9

23.6

Minor 5ss

39.6

-1.2

2.8

49.3

46.9

Minor BPS

72.6

0.57

1.4

75.95

35.7

Associated Gene:

Gene:

ZMYND19

Ensembl Gene ID:

ENSAPLG00000005335

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023928

1483783 - 1491732

7950

ENSAPLT00000005511

1483783 - 1492059

8277