Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_18_1496782_1496928_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1496782 - 1496928

Intron Length:

147

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCCCA

5'SS Class:

strong_major

3'SS Sequence:

ATTGTCGGCGAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTCCCAA

U12 Branch Point Sequence:

TTCTTCCCAATT

Flanking Amino Acid:

GTYHLRLPAEGDQRGSNAAC

Intron Amino Acid Position:

131

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.3

0.79

0.9

67.6

39.4

Major BPS

63.1

0.33

1.2

72.7

34.3

Major PPT

52.7

0.06

1.2

52.8

41.3

Minor 5ss

32.7

-2

39.6

45.9

Minor BPS

54.2

0.21

1.9

76.34

40.7

Associated Gene:

Gene:

DPH7

Ensembl Gene ID:

ENSAPLG00000027230

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041355

1496392 - 1505435

9044