Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_18_1500881_1501692_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1500881 - 1501692

Intron Length:

812

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAACCAAG

5'SS Class:

major

3'SS Sequence:

TGCTGTTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTATCAT

U12 Branch Point Sequence:

TCTGCTGTATGA

Flanking Amino Acid:

SPETPVFTSKRHSMGVCSIQ

Intron Amino Acid Position:

317

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.61

1.2

68.8

43.8

Major BPS

70.5

0.51

1.3

41.2

Major PPT

0.72

0.9

76.2

37.8

Minor 5ss

44.3

-0.6

2.7

56.9

47.4

Minor BPS

40.8

-0.7

2.4

53.76

45.6

Associated Gene:

Gene:

DPH7

Ensembl Gene ID:

ENSAPLG00000027230

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041355

1496392 - 1505435

9044