Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_18_1510468_1510887_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1510468 - 1510887

Intron Length:

420

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAATGTAC

5'SS Class:

major

3'SS Sequence:

ATTCTTCCCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATTAAT

U12 Branch Point Sequence:

AAGTCATTAATT

Flanking Amino Acid:

FVEDRIQTTMLTGIAIGAAF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.2

0.52

1.1

64.6

35.8

Major BPS

79.4

0.73

0.9

79.6

29.1

Major PPT

79.1

0.66

0.8

73.3

Minor 5ss

37.2

-1.4

3.3

46.7

43.5

Minor BPS

66.3

0.59

1.6

77.05

39.3

Associated Gene:

Gene:

PNPLA7

Ensembl Gene ID:

ENSAPLG00000003225

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021325

1508012 - 1633005

124994

ENSAPLT00000003431

1508012 - 1633781

125770