Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_18_1514351_1514794_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1514351 - 1514794

Intron Length:

444

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACTTGGG

5'SS Class:

major

3'SS Sequence:

TTTTGATTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TCATTCTGACCT

Flanking Amino Acid:

KRAKVLNLAKRILRIKKECP

Intron Amino Acid Position:

122

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.3

0.55

1.1

60.1

44.8

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

82.9

0.74

0.8

78.1

35.3

Minor 5ss

31.1

-2.2

3.3

41.2

45.1

Minor BPS

55.6

0.25

1.8

73.08

43.7

Associated Gene:

Gene:

PNPLA7

Ensembl Gene ID:

ENSAPLG00000003225

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021325

1508012 - 1633005

124994

ENSAPLT00000003431

1508012 - 1633781

125770