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Intron Name: Anas_platyrhynchos_platyrhynchos_18_1523780_1525178_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1523780 - 1525178

Intron Length:

1399

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCTTC

5'SS Class:

strong_major

3'SS Sequence:

CCTTGATTTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCCTAT

U12 Branch Point Sequence:

TGCCCCTTGATT

Flanking Amino Acid:

YPETLVRVVQIIMVRLQRVT

Intron Amino Acid Position:

293

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.97

0.8

82.3

32.2

Major BPS

68.8

0.47

1.3

66.7

41.7

Major PPT

74.5

0.55

0.9

65.7

Minor 5ss

48.4

-0.1

2.8

67.4

Minor BPS

0.68

1.2

77.45

39.1

Associated Gene:

Gene:

PNPLA7

Ensembl Gene ID:

ENSAPLG00000003225

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021325

1508012 - 1633005

124994

ENSAPLT00000003431

1508012 - 1633781

125770