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Intron Name: Anas_platyrhynchos_platyrhynchos_18_1536967_1537774_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1536967 - 1537774

Intron Length:

808

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCAAG

5'SS Class:

strong_major

3'SS Sequence:

CTGTTTTCTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTTAT

U12 Branch Point Sequence:

GGGATTTTATTG

Flanking Amino Acid:

GTVLSRQGDQDVNVCFVVSG

Intron Amino Acid Position:

512

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

0.9

38.4

Major BPS

87.7

0.94

0.8

77.7

36.7

Major PPT

84.5

0.78

0.8

37.3

Minor 5ss

33.3

-1.9

2.8

38.7

46.6

Minor BPS

44.3

-0.5

1.6

40.61

Associated Gene:

Gene:

PNPLA7

Ensembl Gene ID:

ENSAPLG00000003225

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021325

1508012 - 1633005

124994

ENSAPLT00000003431

1508012 - 1633781

125770