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Intron Name: Anas_platyrhynchos_platyrhynchos_18_1580100_1580662_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1580100 - 1580662

Intron Length:

563

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTACGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TTTCTGTCCCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATAAAA

U12 Branch Point Sequence:

TTGTTCTTTTCT

Flanking Amino Acid:

KQRLGSAALDSIHEYRLTSW

Intron Amino Acid Position:

795

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.83

0.9

75.5

35.8

Major BPS

0.08

60.9

31.3

Major PPT

80.8

0.69

0.8

73.1

37.3

Minor 5ss

32.9

-2

3.3

44.7

43.3

Minor BPS

45.1

-0.3

3.6

79.16

43.2

Associated Gene:

Gene:

PNPLA7

Ensembl Gene ID:

ENSAPLG00000003225

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021325

1508012 - 1633005

124994

ENSAPLT00000003431

1508012 - 1633781

125770