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Intron Name: Anas_platyrhynchos_platyrhynchos_18_1582626_1598513_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1582626 - 1598513

Intron Length:

15888

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTCCA

5'SS Class:

strong_major

3'SS Sequence:

CTTCTTGTCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGATAAT

U12 Branch Point Sequence:

TTTGTCTGATAA

Flanking Amino Acid:

IAVVLGGGGARGCSQVGVIR

Intron Amino Acid Position:

952

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

71.6

40.2

Major BPS

72.6

0.56

1.2

72.3

40.4

Major PPT

80.3

0.68

0.8

75.1

33.3

Minor 5ss

33.1

-1.9

3.1

41.9

44.7

Minor BPS

48.1

-0.1

1.9

64.99

41.3

Associated Gene:

Gene:

PNPLA7

Ensembl Gene ID:

ENSAPLG00000003225

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021325

1508012 - 1633005

124994

ENSAPLT00000003431

1508012 - 1633781

125770