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Intron Name: Anas_platyrhynchos_platyrhynchos_18_1598671_1606477_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1598671 - 1606477

Intron Length:

7807

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGAATT

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTAAA

U12 Branch Point Sequence:

TTACCTTTGACT

Flanking Amino Acid:

MRIKARQWAMVMNSVFKTIL

Intron Amino Acid Position:

1005

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.2

0.88

0.8

86.3

28.9

Major BPS

77.8

0.69

78.2

31.8

Major PPT

92.1

0.95

0.5

92.3

18.1

Minor 5ss

39.6

-1.2

3.2

55.5

42.8

Minor BPS

74.6

0.86

1.1

85.56

34.2

Associated Gene:

Gene:

PNPLA7

Ensembl Gene ID:

ENSAPLG00000003225

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021325

1508012 - 1633005

124994

ENSAPLT00000003431

1508012 - 1633781

125770