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Intron Name: Anas_platyrhynchos_platyrhynchos_18_1661887_1670037_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

1661887 - 1670037

Intron Length:

8151

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAGTT

5'SS Class:

strong_major

3'SS Sequence:

TACGTATCTGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTCAT

U12 Branch Point Sequence:

CTGACTTGAAAC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.5

1.02

0.7

25.3

Major BPS

72.5

0.56

1.2

39.9

Major PPT

69.3

0.43

0.9

38.3

Minor 5ss

36.4

-1.5

3.6

55.7

48.5

Minor BPS

49.1

-0

1.6

57.08

41.4

Associated Gene:

Gene:

NSMF

Ensembl Gene ID:

ENSAPLG00000002458

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021960

1653951 - 1696254

42304