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Intron Name: Anas_platyrhynchos_platyrhynchos_18_1661887_1672443_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1661887 - 1672443

Intron Length:

10557

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAGTT

5'SS Class:

strong_major

3'SS Sequence:

CAATTTGTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAGTAAA

U12 Branch Point Sequence:

TTGGTGTGAAGC

Flanking Amino Acid:

QNHPEGRNGSDHLLADSYIG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.5

1.02

0.7

25.3

Major BPS

55.1

0.13

1.2

57.3

36.3

Major PPT

76.2

0.59

41.6

Minor 5ss

36.4

-1.5

3.6

55.7

48.5

Minor BPS

41.5

-0.6

2.3

53.88

44.4

Associated Gene:

Gene:

NSMF

Ensembl Gene ID:

ENSAPLG00000002458

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046240

1653951 - 1696254

42304

ENSAPLT00000028541

1653951 - 1696254

42304

ENSAPLT00000002486

1653951 - 1696254

42304