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Intron Name: Anas_platyrhynchos_platyrhynchos_18_1677376_1680106_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1677376 - 1680106

Intron Length:

2731

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGC|GTAAGTGAA

5'SS Class:

major

3'SS Sequence:

AATGGTTTCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTAAAAT

U12 Branch Point Sequence:

ATGGCTTAAAAT

Flanking Amino Acid:

SFQTATTTMQAAFRGYAERK

Intron Amino Acid Position:

238

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.9

0.47

1.3

68.5

38.7

Major BPS

70.6

0.51

1.1

75.9

34.4

Major PPT

68.4

0.41

58.2

46.5

Minor 5ss

32.9

-1.9

3.2

35.5

41.5

Minor BPS

49.2

0.02

1.9

66.92

44.1

Associated Gene:

Gene:

NSMF

Ensembl Gene ID:

ENSAPLG00000002458

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046240

1653951 - 1696254

42304

ENSAPLT00000021960

1653951 - 1696254

42304

ENSAPLT00000002486

1653951 - 1696254

42304