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Intron Name: Anas_platyrhynchos_platyrhynchos_18_1677376_1684229_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1677376 - 1684229

Intron Length:

6854

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGC|GTAAGTGAA

5'SS Class:

major

3'SS Sequence:

GCCTTTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTAATAT

U12 Branch Point Sequence:

TTTTCTCAGAGA

Flanking Amino Acid:

SFQTATTTMQANFRKHLRMV

Intron Amino Acid Position:

238

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.9

0.47

1.3

68.5

38.7

Major BPS

67.5

0.44

1.1

63.7

42.3

Major PPT

0.74

0.8

80.2

31.8

Minor 5ss

32.9

-1.9

3.2

35.5

41.5

Minor BPS

-0.3

2.2

66.57

40.3

Associated Gene:

Gene:

NSMF

Ensembl Gene ID:

ENSAPLG00000002458

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028541

1653951 - 1696254

42304