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Intron Name: Anas_platyrhynchos_platyrhynchos_18_1680176_1684229_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1680176 - 1684229

Intron Length:

4054

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGGCCC

5'SS Class:

major

3'SS Sequence:

GCCTTTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTAATAT

U12 Branch Point Sequence:

TTTTCTCAGAGA

Flanking Amino Acid:

RENDSAAVIQRNFRKHLRMV

Intron Amino Acid Position:

261

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.7

0.65

1.1

64.9

37.8

Major BPS

67.5

0.44

1.1

63.7

42.3

Major PPT

0.74

0.8

80.2

31.8

Minor 5ss

30.6

-2.2

3.5

42.1

44.9

Minor BPS

-0.3

2.2

66.57

40.3

Associated Gene:

Gene:

NSMF

Ensembl Gene ID:

ENSAPLG00000002458

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021960

1653951 - 1696254

42304

ENSAPLT00000002486

1653951 - 1696254

42304

ENSAPLT00000046240

1653951 - 1696254

42304