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Intron Name: Anas_platyrhynchos_platyrhynchos_18_1684283_1688110_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1684283 - 1688110

Intron Length:

3828

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTGAC

5'SS Class:

strong_major

3'SS Sequence:

CGTGTTCTGACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

TTGTAATGCACC

Flanking Amino Acid:

MVGSRRVKAQSHDLQDSCGT

Intron Amino Acid Position:

279

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

0.9

78.6

28.8

Major BPS

84.4

0.85

1.1

34.5

Major PPT

69.5

0.44

1.1

64.5

41.5

Minor 5ss

34.7

-1.7

3.2

43.7

38.1

Minor BPS

-0.4

2.3

61.65

43.1

Associated Gene:

Gene:

NSMF

Ensembl Gene ID:

ENSAPLG00000002458

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046240

1653951 - 1696254

42304