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Intron Name: Anas_platyrhynchos_platyrhynchos_18_1689229_1690238_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1689229 - 1690238

Intron Length:

1010

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAT|GTAAGTATA

5'SS Class:

strong_major

3'SS Sequence:

TCTTTGTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTTAC

U12 Branch Point Sequence:

TGATGTTTACCC

Flanking Amino Acid:

DDPSIIPILYDHEHATFDDI

Intron Amino Acid Position:

378

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.9

89.1

24.1

Major BPS

71.4

0.53

1.1

63.4

Major PPT

0.85

0.8

80.2

37.3

Minor 5ss

41.7

-0.9

2.8

41.5

Minor BPS

49.7

-0

63.51

42.2

Associated Gene:

Gene:

NSMF

Ensembl Gene ID:

ENSAPLG00000002458

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021960

1653951 - 1696254

42304

ENSAPLT00000002486

1653951 - 1696254

42304

ENSAPLT00000046240

1653951 - 1696254

42304

ENSAPLT00000028541

1653951 - 1696254

42304