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Intron Name: Anas_platyrhynchos_platyrhynchos_18_1690931_1692062_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1690931 - 1692062

Intron Length:

1132

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACATAGA

5'SS Class:

major

3'SS Sequence:

CTCTCTCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTTAG

U12 Branch Point Sequence:

TGGTTGGCATCT

Flanking Amino Acid:

KIWKMLIFCQGGPGHLYLLK

Intron Amino Acid Position:

413

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.2

0.64

71.5

40.2

Major BPS

59.9

0.25

1.6

59.6

46.8

Major PPT

85.4

0.8

0.7

80.1

25.2

Minor 5ss

33.4

-1.9

42.9

Minor BPS

35.4

-1

2.6

55.91

46.4

Associated Gene:

Gene:

NSMF

Ensembl Gene ID:

ENSAPLG00000002458

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021960

1653951 - 1696254

42304

ENSAPLT00000002486

1653951 - 1696254

42304

ENSAPLT00000046240

1653951 - 1696254

42304

ENSAPLT00000028541

1653951 - 1696254

42304