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Intron Name: Anas_platyrhynchos_platyrhynchos_18_1692143_1693724_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1692143 - 1693724

Intron Length:

1582

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTGAGTGAC

5'SS Class:

major

3'SS Sequence:

TTGTTTCTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAC

U12 Branch Point Sequence:

ACATTTCTAACT

Flanking Amino Acid:

AKVEKEEDMILFWKRLSRLM

Intron Amino Acid Position:

439

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.3

0.48

1.1

65.2

34.6

Major BPS

84.6

0.86

0.8

83.9

22.3

Major PPT

88.5

0.87

0.8

81.2

36.5

Minor 5ss

30.4

-2.2

3.2

44.3

43.6

Minor BPS

56.7

0.29

1.6

71.25

39.8

Associated Gene:

Gene:

NSMF

Ensembl Gene ID:

ENSAPLG00000002458

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021960

1653951 - 1696254

42304

ENSAPLT00000002486

1653951 - 1696254

42304

ENSAPLT00000046240

1653951 - 1696254

42304

ENSAPLT00000028541

1653951 - 1696254

42304