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Intron Name: Anas_platyrhynchos_platyrhynchos_18_1693828_1694196_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1693828 - 1694196

Intron Length:

369

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAGCT

5'SS Class:

strong_major

3'SS Sequence:

GTTTTCCTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTATAT

U12 Branch Point Sequence:

AACTCTTTATAT

Flanking Amino Acid:

YVLGNPNGEKLFQNLKNLMN

Intron Amino Acid Position:

474

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.6

0.98

0.8

81.6

Major BPS

79.2

0.73

75.3

39.4

Major PPT

88.1

0.86

0.7

85.4

29.3

Minor 5ss

33.1

-1.9

3.4

48.3

47.4

Minor BPS

54.5

0.22

1.7

68.66

42.2

Associated Gene:

Gene:

NSMF

Ensembl Gene ID:

ENSAPLG00000002458

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046240

1653951 - 1696254

42304

ENSAPLT00000028541

1653951 - 1696254

42304

ENSAPLT00000021960

1653951 - 1696254

42304

ENSAPLT00000002486

1653951 - 1696254

42304