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Intron Name: Anas_platyrhynchos_platyrhynchos_18_1706609_1708418_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1706609 - 1708418

Intron Length:

1810

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TTG|GCCTGGGGA

5'SS Class:

major

3'SS Sequence:

AGGGGGCTGGTAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ACCTGAA

U12 Branch Point Sequence:

TACTCGTTCAGT

Flanking Amino Acid:

VGANLVEEAVVVFCCQSWHC

Intron Amino Acid Position:

132

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.2

0.31

1.2

54.2

39.9

Major BPS

60.8

0.27

51.3

35.5

Major PPT

47.4

-0.1

1.1

35.9

Minor 5ss

19.9

-3.5

3.9

26.2

Minor BPS

45.4

-0.2

2.6

68.36

48.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017831

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022903

1706475 - 1712386

5912