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Intron Name: Anas_platyrhynchos_platyrhynchos_18_1709602_1722872_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1709602 - 1722872

Intron Length:

13271

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACTGCC

5'SS Class:

strong_major

3'SS Sequence:

TGCTGTTGTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TGCTTTGTAATA

Flanking Amino Acid:

MSKTGSRRKKMKISFNETSL

Intron Amino Acid Position:

300

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

1.1

74.6

37.4

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

68.9

0.43

61.4

44.6

Minor 5ss

39.5

-1.2

3.1

53.7

43.5

Minor BPS

49.8

-0

62.57

38.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017976

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041570

1708269 - 1724742

16474