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Intron Name: Anas_platyrhynchos_platyrhynchos_18_1728812_1728892_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1728812 - 1728892

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGCGGG

5'SS Class:

major

3'SS Sequence:

CCGGGCCGGGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GGCTGAC

U12 Branch Point Sequence:

GGGGGCTGACGG

Flanking Amino Acid:

LQGYNAALLEGLAELRARRD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.6

0.53

1.1

45.2

Major BPS

49.4

-0

1.3

42.8

41.8

Major PPT

49.3

-0

1.1

38.5

Minor 5ss

29.9

-2.3

3.2

29.1

43.5

Minor BPS

32.7

-1.4

2.1

41.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020038

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024745

1726647 - 1728944

2298