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Intron Name: Anas_platyrhynchos_platyrhynchos_18_1799426_1801379_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1799426 - 1801379

Intron Length:

1954

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAGGTTAA

5'SS Class:

major

3'SS Sequence:

TGTTTTCCCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAGTGAA

U12 Branch Point Sequence:

TGGAAGTGAAGA

Flanking Amino Acid:

WYDSTGPQYARLQREEGDGA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.9

0.66

1.1

71.5

36.8

Major BPS

55.5

0.14

1.1

47.1

37.9

Major PPT

81.5

0.71

0.8

73.9

36.8

Minor 5ss

38.6

-1.3

3.1

48.8

47.3

Minor BPS

37.5

-0.9

2.3

46.79

42.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015925

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016645

1794821 - 1822696

27876