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Intron Name: Anas_platyrhynchos_platyrhynchos_18_1801609_1804499_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1801609 - 1804499

Intron Length:

2891

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTGTA

5'SS Class:

strong_major

3'SS Sequence:

TTCTCTTCTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTGAT

U12 Branch Point Sequence:

AGTTACTGATAA

Flanking Amino Acid:

ISWKDRQGRKVIQGNIDTYD

Intron Amino Acid Position:

133

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.2

1.02

0.7

86.6

22.2

Major BPS

83.5

0.83

0.8

71.6

36.4

Major PPT

87.9

0.85

0.7

80.8

31.3

Minor 5ss

30.8

-2.2

3.2

39.9

46.1

Minor BPS

45.7

-0.3

1.9

58.51

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015925

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016645

1794821 - 1822696

27876