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Intron Name: Anas_platyrhynchos_platyrhynchos_18_1807961_1811300_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1807961 - 1811300

Intron Length:

3340

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTGCCCGAC

5'SS Class:

weak_major

3'SS Sequence:

TTGTTGATGGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTGAT

U12 Branch Point Sequence:

GCTTTGTTGATG

Flanking Amino Acid:

GSVPKARGYKIVLNSSVFAE

Intron Amino Acid Position:

314

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

51.3

0.03

1.2

47.6

37.5

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

70.1

0.45

1.1

66.4

Minor 5ss

37.4

-1.4

3.6

48.6

42.5

Minor BPS

47.6

-0.3

2.1

53.89

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015925

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016645

1794821 - 1822696

27876