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Intron Name: Anas_platyrhynchos_platyrhynchos_18_1819771_1821169_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1819771 - 1821169

Intron Length:

1399

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAGGCACT

5'SS Class:

major

3'SS Sequence:

TCTCTGTTCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTACAA

U12 Branch Point Sequence:

TCTCTGTTCACA

Flanking Amino Acid:

RWMAWESILLGKFTTASDVW

Intron Amino Acid Position:

708

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.5

0.56

1.1

42.9

Major BPS

61.2

0.28

1.1

70.6

34.3

Major PPT

80.6

0.69

0.8

75.1

33.3

Minor 5ss

40.8

-1

3.2

43.4

Minor BPS

46.6

-0.2

2.4

63.68

43.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015925

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016645

1794821 - 1822696

27876