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Intron Name: Anas_platyrhynchos_platyrhynchos_18_1821320_1822555_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1821320 - 1822555

Intron Length:

1236

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAAAG

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAG

U12 Branch Point Sequence:

AAACACTGAACT

Flanking Amino Acid:

GEFFRSQGRQIYLSQTPLCP

Intron Amino Acid Position:

758

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.4

0.98

0.8

80.7

33.7

Major BPS

75.6

0.64

1.5

34.5

Major PPT

95.9

1.03

0.5

95.6

15.1

Minor 5ss

32.8

-2

2.9

39.4

46.1

Minor BPS

53.4

0.18

1.6

69.05

40.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015925

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016645

1794821 - 1822696

27876