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Intron Name: Anas_platyrhynchos_platyrhynchos_18_1852508_1853408_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1852508 - 1853408

Intron Length:

901

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAACTGTG

5'SS Class:

strong_major

3'SS Sequence:

GAAATGACATCAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AAATGAC

U12 Branch Point Sequence:

TTTTCCTCCATT

Flanking Amino Acid:

NKICGMSVEELVQESQTSLD

Intron Amino Acid Position:

381

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.4

0.76

1.1

76.2

39.9

Major BPS

58.2

0.2

49.5

35.1

Major PPT

50.7

0.02

1.1

45.7

45.1

Minor 5ss

41.8

-0.9

3.2

57.8

46.8

Minor BPS

65.7

0.57

88.16

37.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015291

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015945

1850766 - 1862406

11641