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Intron Name: Anas_platyrhynchos_platyrhynchos_18_1854607_1855845_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1854607 - 1855845

Intron Length:

1239

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGAGTACC

5'SS Class:

strong_major

3'SS Sequence:

ATTCTCTCTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTTAT

U12 Branch Point Sequence:

CTTGTTTTATTC

Flanking Amino Acid:

RRRLLSMLIQDQKSAKTVSN

Intron Amino Acid Position:

257

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

0.9

77.7

30.1

Major BPS

78.7

0.71

1.2

71.7

44.6

Major PPT

78.6

0.64

0.8

70.8

35.4

Minor 5ss

33.3

-1.9

2.7

38.5

32.5

Minor BPS

49.9

-0

1.7

60.49

40.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015291

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015945

1850766 - 1862406

11641