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Intron Name: Anas_platyrhynchos_platyrhynchos_18_1856071_1857353_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1856071 - 1857353

Intron Length:

1283

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGGAT

5'SS Class:

strong_major

3'SS Sequence:

CTTTTGGGGTCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTAAT

U12 Branch Point Sequence:

GTCCTAATAACC

Flanking Amino Acid:

VNYVLENFFKYDWQGHLVPS

Intron Amino Acid Position:

182

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.97

0.8

82.1

Major BPS

81.9

0.79

0.9

80.1

Major PPT

65.1

0.34

1.2

64.9

45.6

Minor 5ss

30.9

-2.2

3.6

45.9

49.3

Minor BPS

-0.2

1.8

58.68

39.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015291

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015945

1850766 - 1862406

11641