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Intron Name: Anas_platyrhynchos_platyrhynchos_18_1857514_1858252_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1857514 - 1858252

Intron Length:

739

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTGAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

CTTTTCTGTCTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTAAC

U12 Branch Point Sequence:

GTAACAGCAATT

Flanking Amino Acid:

LGATTSTRQLNLSHPTFSDD

Intron Amino Acid Position:

128

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

0.9

73.9

29.7

Major BPS

62.2

0.3

1.2

38.7

Major PPT

79.4

0.66

0.9

73.4

37.1

Minor 5ss

29.2

-2.4

3.1

32.8

35.7

Minor BPS

41.3

-0.5

2.3

60.29

42.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015291

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015945

1850766 - 1862406

11641