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Intron Name: Anas_platyrhynchos_platyrhynchos_18_1858404_1860048_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1858404 - 1860048

Intron Length:

1645

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGTGC

5'SS Class:

strong_major

3'SS Sequence:

CCCTGATCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTCCAT

U12 Branch Point Sequence:

TTTCCCCTGATC

Flanking Amino Acid:

ITECSSCVVPGPGISSYSDS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.7

0.91

0.9

73.9

Major BPS

68.5

0.46

1.2

78.5

35.1

Major PPT

67.2

0.39

0.9

57.4

37.6

Minor 5ss

37.1

-1.5

3.3

50.2

46.4

Minor BPS

0.39

1.7

76.37

33.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015291

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015945

1850766 - 1862406

11641