Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_18_1865276_1866045_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1865276 - 1866045

Intron Length:

770

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAACCG

5'SS Class:

major

3'SS Sequence:

CTGTTGATCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTGAT

U12 Branch Point Sequence:

GTTCCCTACACT

Flanking Amino Acid:

VMCVMKHLPKVPEKKLKLVM

Intron Amino Acid Position:

123

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.5

0.67

62.4

42.2

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

71.6

0.49

40.1

Minor 5ss

31.6

-2.1

3.1

45.5

Minor BPS

55.1

0.24

2.1

78.23

43.7

Associated Gene:

Gene:

NELFB

Ensembl Gene ID:

ENSAPLG00000014732

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015400

1864456 - 1875619

11164