Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_18_191448_192108_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

191448 - 192108

Intron Length:

661

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAC|GTAAGTGCC

5'SS Class:

major

3'SS Sequence:

CCCTGCCTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GATTCAC

U12 Branch Point Sequence:

GGATTCACGACA

Flanking Amino Acid:

DKLKVSYAAVTPEGCRRRET

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.3

0.67

1.3

74.6

37.4

Major BPS

64.5

0.36

1.2

69.3

37.7

Major PPT

75.6

0.58

0.8

68.4

31.9

Minor 5ss

35.3

-1.7

3.2

44.3

36.5

Minor BPS

45.2

-0.3

1.8

53.9

37.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002251

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039853

189990 - 193605

3616

ENSAPLT00000002322

189196 - 192655

3460