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Intron Name: Anas_platyrhynchos_platyrhynchos_18_1936695_1942569_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1936695 - 1942569

Intron Length:

5875

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGGGTGGC

5'SS Class:

strong_major

3'SS Sequence:

TTTCTGTTAACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTTAC

U12 Branch Point Sequence:

TTTCTGTTAACA

Flanking Amino Acid:

EGAECWQCSRAIKVSCVGFC

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

67.2

38.1

Major BPS

66.4

0.41

1.1

57.4

41.4

Major PPT

80.8

0.69

0.9

76.9

Minor 5ss

26.2

-2.7

3.2

34.3

Minor BPS

64.8

0.46

80.35

35.4

Associated Gene:

Gene:

ARRDC1

Ensembl Gene ID:

ENSAPLG00000014061

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046421

1935819 - 1957758

21940