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Intron Name: Anas_platyrhynchos_platyrhynchos_18_1954397_1954869_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1954397 - 1954869

Intron Length:

473

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCACC

5'SS Class:

strong_major

3'SS Sequence:

CCTTCTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTACAA

U12 Branch Point Sequence:

TTTTCCTTCTTT

Flanking Amino Acid:

SLIHIDYYIQVSLKSPEVSV

Intron Amino Acid Position:

266

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.5

0.84

0.9

74.9

35.3

Major BPS

58.4

0.21

1.2

39.8

Major PPT

87.5

0.84

0.7

79.8

32.2

Minor 5ss

35.2

-1.7

2.8

43.7

Minor BPS

48.4

-0

3.6

87.57

38.6

Associated Gene:

Gene:

ARRDC1

Ensembl Gene ID:

ENSAPLG00000014061

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046421

1935819 - 1957758

21940

ENSAPLT00000014676

1928906 - 1957758

28853