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Intron Name: Anas_platyrhynchos_platyrhynchos_18_197210_197723_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

197210 - 197723

Intron Length:

514

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAGCA

5'SS Class:

strong_major

3'SS Sequence:

CCTTCTCTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGCTCAG

U12 Branch Point Sequence:

GCCAGCTCAGCC

Flanking Amino Acid:

DEEILILPQTGRPTSCCRPE

Intron Amino Acid Position:

178

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.6

0.96

0.8

77.8

Major BPS

48.8

-0

1.5

57.1

41.8

Major PPT

84.8

0.78

0.7

76.5

32.1

Minor 5ss

30.7

-2.2

3.3

39.5

45.9

Minor BPS

-0.7

43.91

43.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000000622

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018553

196040 - 200017

3978