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Intron Name: Anas_platyrhynchos_platyrhynchos_18_203461_210669_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

203461 - 210669

Intron Length:

7209

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GGG|GCGGAGCGG

5'SS Class:

weak_major

3'SS Sequence:

CCAGCATGGGGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CCAGCAT

U12 Branch Point Sequence:

TCTGGCACCACC

Flanking Amino Acid:

VILPPPRPGRGEAHLCVSEQ

Intron Amino Acid Position:

137

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

53.1

0.07

1.2

40.3

38.1

Major BPS

45.4

-0.2

1.4

51.3

42.7

Major PPT

41.9

-0.4

1.7

38.4

38.8

Minor 5ss

11.9

-4.4

3.5

10.8

28.4

Minor BPS

37.5

-1

2.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016650

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033433

203351 - 213117

9767