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Intron Name: Anas_platyrhynchos_platyrhynchos_18_2050929_2051427_F


Intron Information:

Intron Rank:
9

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
2050929 - 2051427

Intron Length:
499

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAA|GTAAGAAAA

5'SS Class:
strong_major

3'SS Sequence:
CCCACTCCTGCAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TATTAAT

U12 Branch Point Sequence:
TGAGTATTAATT

Flanking Amino Acid:
ESALIALDSEKPKKLRFHPK

Intron Amino Acid Position:
374

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
82.7
0.77
0.9
79.7
27.9

Major BPS
91.8
1.04
0.7
90.2
19.3

Major PPT
72.1
0.5
0.8
64.9
30.6

Minor 5ss
34.5
-1.8
3
40.8
39.4

Minor BPS
54.6
0.22
1.7
70.31
40.7

Associated Gene:

Gene:
EHMT1

Ensembl Gene ID:

Chromosome:
18

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

2035934 - 2075949
40016

2041282 - 2075949
34668