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Intron Name: Anas_platyrhynchos_platyrhynchos_18_2074360_2075348_F


Intron Information:

Intron Rank:
22

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
2074360 - 2075348

Intron Length:
989

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CGG|GTAGGTACC

5'SS Class:
major

3'SS Sequence:
CTCTCTCTTGCAG|C

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TGCACAT

U12 Branch Point Sequence:
ATTGCGGTGACC

Flanking Amino Acid:
TRHIEAGEEIGFDYGDRFWD

Intron Amino Acid Position:
882

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
77.1
0.64
1.1
70.2
38.5

Major BPS
62.5
0.31
1.2
69
38.9

Major PPT
85.4
0.8
0.7
80.1
25.2

Minor 5ss
35.2
-1.7
2.9
38
39.8

Minor BPS
44.2
-0.4
2.6
63.49
42.7

Associated Gene:

Gene:
EHMT1

Ensembl Gene ID:

Chromosome:
18

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

2041282 - 2075949
34668

2035934 - 2075949
40016