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Intron Name: Anas_platyrhynchos_platyrhynchos_18_2108667_2199813_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2108667 - 2199813

Intron Length:

91147

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGTGAC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTGACATTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAC

U12 Branch Point Sequence:

TCTTTTTTGACA

Flanking Amino Acid:

NVMDFVVVLTGILATAGTDF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.2

0.85

0.9

75.8

34.3

Major BPS

86.5

0.91

0.8

77.4

37.4

Major PPT

72.6

0.51

0.9

72.5

37.6

Minor 5ss

32.5

-2

3.1

35.2

41.4

Minor BPS

73.1

0.72

1.1

77.15

33.9

Associated Gene:

Gene:

CACNA1B

Ensembl Gene ID:

ENSAPLG00000005963

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020946

2102028 - 2375046

273019

ENSAPLT00000006711

2102028 - 2375046

273019

ENSAPLT00000030886

2102028 - 2375046

273019