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Intron Name: Anas_platyrhynchos_platyrhynchos_18_2202250_2206438_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2202250 - 2206438

Intron Length:

4189

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGACTG

5'SS Class:

strong_major

3'SS Sequence:

CTCTCCCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGGTGAC

U12 Branch Point Sequence:

TGGTCGGTGACT

Flanking Amino Acid:

FHKTCFSNETGDEVGDFPCG

Intron Amino Acid Position:

160

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.5

0.84

0.9

71.5

40.2

Major BPS

47.5

-0.1

1.3

38.2

41.7

Major PPT

79.6

0.67

0.7

73.3

24.9

Minor 5ss

30.1

-2.3

3.1

38.3

46.6

Minor BPS

46.5

-0.1

2.6

71.53

45.7

Associated Gene:

Gene:

CACNA1B

Ensembl Gene ID:

ENSAPLG00000005963

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006711

2102028 - 2375046

273019

ENSAPLT00000030886

2102028 - 2375046

273019

ENSAPLT00000020946

2102028 - 2375046

273019